Data Driven Design

The Data Driven Design (D3) application provides an intuitive interface for analyzing sequence-aligned assay data with statistical and machine learning methods. It automates the processes of modeling the data and predicting putative sequences that may have desirable properties. A few key features are listed below. See the User’s Manual (32 MB)¬†for full details.

  • Determine the sites that are important for each response.
  • Calculate regression parameters to determine the effect of substitutions.
  • Run cross-validation analyses to find the most accurate machine learning methods for a given response.
  • Generate a set of putative sequences that balance the competing concerns of desirability and sequence diversity.

Data Driven Design GUI